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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015837707.1_cds_XP_016506722.1_19924
CDS Infomation

[gene=LOC107824466] [db_xref=GeneID:107824466] [protein=serine hydroxymethyltransferase 3, chloroplastic-like] [protein_id=XP_016506722.1] [location=join(53103..53319,54324..54519,54709..54883,54966..55083,55177..55289,55404..55526,56145..56249,56611..56697,56777..56884,57298..57370,57449..57723)] [gbkey=CDS]
Sequence

ATGGAGGCTTGCTGTGGAGCTGCAGTGATGGGTTCTTTTATTCAGCAACCTGTGTGGGTT
AAAGGATCAGCTTTTCCTTTAAAAGGTGAAATGATAAAATTAAATGGGATGGTTAAATTA
TGCTCTGTTAAGCCTTGCGGAGCCTCTCAACTTGAAGGGAGCTTGGTCACAGGAAGGCCT
CCTTCTTCTGTTTCTGTTCCTATCCCAGAAATGGCAGGTGCTGGGAGCAGCTTTATAGAC
TATGAATTGGCTGAAGCTGATCCTGAAGTTCGTGGTATTATTGACAAAGAGAAGGAACGC
CAATTTCGGAGCTTAGAGCTTATTGCCTCTGAGAATTTCACATCTCGAGCAGTGATGGAG
GCAGTGGGTTCTTGCCTTACAAACAAATACTCCGAAGGACTACCAGGCAAAAGATATTAT
GGTGGAAACGAGTACATTGACGAGTTAGAAATACTCTGTCAAGAGAGGGCTTTGGCAGCC
TTTAACTTAGATGGAAAACAGTGGGGTGTCAATGTTCAACCACTATCTGGCTCTCCAGCA
AATTTTGAAGTTTATACAGCAATTCTTAATCCACATGACCGGATCATGGGATTGGACTTA
CCTCATGGAGGTCATTTGTCCCATGGATTTATGACTCCTAAAAGACGAGTTTCAGGCACA
TCTATTTACTTTGAATCCATGCCTTATCGGCTTGATGAATCTTCAGGACTTGTTGATTAT
GAAATGCTTGAGAAAACGGCAATCCTTTTTCGGCCAAAACTTATTATTGCCGGTGCTAGT
GCATATCCCCGAGATTTTGATTATCCTCGTATGAGAAAGATAGCAGATGCTGTTGGAGCC
TTTCTCATGATGGATATGGCTCACATTAGTGGGCTTGTTGCCACCTCTGTAGTTGCTAAT
CCATTTGAATACTGTGACATTGTTACAACGACTACTCACAAGTCTCTGAGAGGTCCTAGA
GGAGGAATGATATTCTTCAAGAAAGATCCCATTCTAGGTGTTGATTTGGAAACTGCCATC
AACAATGCTGTTTTTCCTGGGTTGCAGGGTGGCCCGCATAATCACACAATTGGAGGATTA
GCTGTTTGCTTGAAGTATGCCAAATCACCTGATTTCAAGGCTTATCAGCACAAGGTGGTC
TCTAACTGTAGAGCTCTTGCAAGCCGGTTAACGGAGTTGGGGTACAAGCTGGTTTCTGGA
GGAACTGACAATCATTTGGTTCTAGTGGATCTCAGGCCCTTAGGTACTGATGGTGCTAGA
GTGGAGAAAATACTTGACATGGCATCAATCACGCTCAATAAGAATTCAGTACCCGGTGAT
AAAAGTGCACTAGTGCCTGGTGGTATACGCATAGGTTCACCTGCAATGACCACTCGAGGT
TTCTCTGAGAAGGAATTTGTAACAGTTGCAGACTTCATTAATGAGGGTGTGCAGATAACT
CTTGAGGCCAAGAAGTTAGTCTCTGGTTCAAAGCTTCAAGATTTCTTGAAGTTTGTTACT
TCACCGGAGTTCCCTTTGATCGATAAGGTGTTAAATTTGCAAAGAAGAGTTGAAGCTTTG
ACAACCCAATACCCATTGCCCGGCTTGTGA

Peptide Sequence

PEP ID

XP_016506722.1
PEP Infomation

PREDICTED: serine hydroxymethyltransferase 3, chloroplastic-like [Nicotiana tabacum]
Sequence

MEACCGAAVMGSFIQQPVWVKGSAFPLKGEMIKLNGMVKLCSVKPCGASQLEGSLVTGRP
PSSVSVPIPEMAGAGSSFIDYELAEADPEVRGIIDKEKERQFRSLELIASENFTSRAVME
AVGSCLTNKYSEGLPGKRYYGGNEYIDELEILCQERALAAFNLDGKQWGVNVQPLSGSPA
NFEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESSGLVDY
EMLEKTAILFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVATSVVAN
PFEYCDIVTTTTHKSLRGPRGGMIFFKKDPILGVDLETAINNAVFPGLQGGPHNHTIGGL
AVCLKYAKSPDFKAYQHKVVSNCRALASRLTELGYKLVSGGTDNHLVLVDLRPLGTDGAR
VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVTVADFINEGVQIT
LEAKKLVSGSKLQDFLKFVTSPEFPLIDKVLNLQRRVEALTTQYPLPGL

Transcript Sequence

Gene sequence data has not been registered.